Active projects

  • Human Brain Project web
    • Funding agency: European Commission. H2020 FET Flagship Project
    • Tasks: RUP 7.3.2, SGA1-T7.3.2, SGA1-T1.4.2, SGA2-T1.4.4, SGA2-T7.3.8, SGA2-T7.3.9
    • Duration:
      • RUP: September 2013 - March 2016
      • SGA1: April 2016 - March 2018
      • SGA2: April 2018 - March 2021
  • Cajal Blue Brain web
    • Funding agency: Ministerio de Ciencia e Innovación
    • Duration: 2009 - 2019
  • RASimAs web
  • NAVAN: Nuevos Avances en Visualización Analítica
    • Funding agency: Ministerio de Economía y Competitividad (MINECO)
    • Duration: Jan 2015 - Dec 2017

For a list of past projects you can follow this link

Tools

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Pyramidal Explorer

A new tool to interactively explore and reveal the detailed organization of the microanatomy of pyramidal neurons.

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NeuroScheme

NeuroScheme is a tool that allows users to navigate through circuit data at different levels of abstraction using schematic representations.

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NeuroTessMesh / NeuroLOTs

NeuroTessMesh / NeuroLOTs is a set of tools and libraries that allow creating neuronal meshes from a minimal skeletal description.

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ViSimpl

ViSimpl integrates a set of visualization and interaction tools that provide a multi-view visual analysis of brain simultation data.

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Libraries

  • nsol: neuroscience objects library

    • Description: nsol is a library that provides data structures to handle basic neuroscientific data, mainly cortex morphologies and structures as Spine, Soma, Neuron, Colum, etc... It also provides some readers and writers to load and store dataset.
    • Links:
  • FiReS: property management for Filtering, Retrieval and Search

    • Description: FiReS is a library that allow registering type-independent properties in objects. FiReS also provides tasks that can use the registered properties for filtering, search, sorting operations over a set of objects.
    • Links:
  • scoop: simple color palettes and mappers

    • Description: scoop is a library for color palettes and color mappers based on QColor.
    • Links:
  • ReTo: Render auxiliary Tools

    • Description: ReTo provides tools for Camera, Shader manager, Picking funcionallity, Object Loader, Spline navegation and a TextureManager.
    • Links:

Publications

Latest publications

  • Juan J. Garcia-Cantero, Juan P. Brito, Susana Mata, Sofia Bayona and Luis Pastor. "NeurotessMesh: A tool for the Generation and Visualization of Neuron Meshes and Adaptive on-the-Fly Refinement". Front. Neuroinform., 22 June 2017. DOI: https://dx.doi.org/10.3389/fninf.2017.00038
  • Sergio E. Galindo, Pablo Toharia, Oscar D. Robles, Luis Pastor. "ViSimpl: Multi-View Visual Analysis of Brain Simulation Data". Front. Neuroinform., 07 October 2016. DOI: https://dx.doi.org/10.3389/fninf.2016.00044
  • Pablo Toharia, Oscar D. Robles, Isabel Fernaud-Espinosa, Julia Makarova, Sergio E. Galindo, Angel Rodriguez, Luis Pastor, Oscar Herreras, Javier DeFelipe and Ruth Benavides-Piccione. "PyramidalExplorer: A New Interactive Tool to Explore Morpho-Functional Relations of Human Pyramidal Neurons". Front. Neuroanat., 06 January 2016. DOI: https://dx.doi.org/10.3389/fnana.2015.00159
  • Pablo Toharia, Juan Morales, Octavio de Juan, Isabel Fernaud, Angel Rodríguez, and Javier DeFelipe "Musical Representation of Dendritic Spine Distribution: A New Exploratory Tool. Neuroinformatics. 2014; 12(2): 341–353. 2014 Jan 7. DOI: 10.1007/s12021-013-9195-0
An exhaustive list of publications can be found here

People

  • Luis Pastor

    Professor. ETSII-URJC, CCS

  • Sofía Bayona

    Faculty. ETSII-URJC, CCS.

  • Marcos García

    Faculty. ETSII-URJC.

  • Susana Mata

    Faculty. ETSII-URJC, CCS.

  • Ángel Rodríguez

    Faculty. ETSIINF-UPM. CCS

  • Pablo Toharia

    Faculty. ETSIINF-UPM, CCS.

  • Juan Pedro Brito Méndez

    Postdoctoral researcher. CCS

  • Fernando Trincado Alonso

    Postdoctoral researcher. URJC

  • Francisco González de Quevedo

    Project Manager. URJC

  • José Miguel Espadero

    System admin. URJC.

  • Gonzalo Bayo Martínez

    PhD Student.URJC

  • Sergio E. Galindo Ruedas

    PhD Student, FPI. URJC

  • Juan José García Cantero

    PhD Student. URJC

  • Cristian Rodíguez Bernal

    PhD Student. URJC

  • Aaron Sujar

    PhD Student, FPU. URJC

  • Juan Guerrero

    Software Engineer. URJC

  • Cosmin Toader

    Software Engineer. URJC

  • Isabel Vidaurre

    Software Engineer. URJC

  • Iago Calvo

    Undergraduate student. URJC

  • Fernando Lucas

    Undergraduate student. URJC

  • Ángel Serrano

    Undergraduate student. URJC

  • Iván Velasco

    Undergraduate student. URJC

  • YouTube channel go
  • vis@GMRV on GitHub go